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Data -> Manduca sexta
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Resource [Genomic]   [GFF3]   [mRNA]   [Protein]
Data source Manduca Base
Publication
Organism strain
Assembly Manduca Base OGS2
Genomic Size 367 Mb
GC content 35.26%
Number of scaffolds 2,457
Scaffold N50 755,801
Number of contigs 38,380
Contig N50 40,396
Gene Set Manduca Base OGS2
Gene 27,529
Protein 27,402
BioSample SAMN00779869
Submitter Human Genome Sequencing Center - BCM
Assembly level Scaffold
GenBank assembly accession GCA_000262585.1
RefSeq assembly accession n/a
WGS Project AIXA01
Assembly method Newbler v. 2.3
Sequencing technology 454
Transcriptome 1
Tissue antennae
Year 2011
Platform Roche 454
Layout SINGLE
Raw reads 156,922
Data accession ERP000526
Assemble software Newbler
Contigs 5,290
Annotated 3,054
Reference Grosse-Wilde E, Kuebler L S, Bucks S, et al. Antennal transcriptome of Manduca sexta[J]. Proceedings of the National Academy of Sciences, 2011, 108(18): 7449-7454.
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